biodiversityDS. – Medium

biodiversityDS.

biodiversityDS.

From RStudio to Remarkable: transform your R development with VS Code

I’m a data scientist working on unraveling the patterns and drivers of global marine biodiversity. I recently switched from RStudio to…

4 min readFeb 22, 2024

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From RStudio to Remarkable: transform your R development with VS Code

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biodiversityDS.

Producing a global map of Sea Surface Oxygen in R

Plotting spatial data is a common task in research, but this requires a set of technical / design tools, which sometimes are not available…

2 min readDec 13, 2021

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Producing a global map of Sea Surface Oxygen in R

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biodiversityDS.
in
Sea change

The Ocean’s Missing Highways: A Threat to Biodiversity

Keywords: Marine Protected Areas; Biodiversity connectivity

2 min readMar 16, 2021

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The Ocean’s Missing Highways: A Threat to Biodiversity

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biodiversityDS.

Mapping Arctic sea ice extent in R

Sea ice generates as seawater freezes, and because it is less dense than sea water, it floats throughout the surface of the ocean. Sea…

4 min readFeb 6, 2021

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Mapping Arctic sea ice extent in R

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biodiversityDS.

Downloading multiple biodiversity records from iNaturalist using Python

iNaturalist is a global platform where naturalists, citizen scientists, and biologists post their observations with photographs…

2 min readSep 14, 2020

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Downloading multiple biodiversity records from iNaturalist using Python

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biodiversityDS.

Reducing spatial autocorrelation in Species Distribution Modelling

A set of R pipelines to reduce the negative effect of spatial autocorrelation.

3 min readAug 5, 2020

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Reducing spatial autocorrelation in Species Distribution Modelling

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biodiversityDS.

Producing a landmass shapefile of the Last Glacial Maximum in R

Few lines of R code to produce a landmass shapefile of the Last Glacial Maximum for Geographic Information Systems.

2 min readDec 22, 2019

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Producing a landmass shapefile of the Last Glacial Maximum in R

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biodiversityDS.

Standardized population genetic diversity in R

Genetic diversity estimation per site or group of sites as standardized allelic richness and standardized number of private alleles…

2 min readDec 5, 2019

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Standardized population genetic diversity in R

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biodiversityDS.

Easy to use marine climate layers for ecological modelling

High-resolution global climate layers for modelling the relationship between the occurrence and abundance of species and their environment.

3 min readDec 4, 2019

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Easy to use marine climate layers for ecological modelling

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biodiversityDS.
in
Sea change

Ice Ages and the Genetic Legacy of the Oceans

The glacial and interglacial cycles of the Quaternary were particularly important in shaping the distribution of species, with range…

2 min readNov 26, 2019

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Ice Ages and the Genetic Legacy of the Oceans

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biodiversityDS.

biodiversityDS.

Hi!! I’m Jorge Assis, a Data Scientist, Marine Ecologist, Climate Change Analyst, R and Python Developer based in Portugal [biodiversitydatascience.com]

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